BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023C11LP1|AL428030
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1739 0.0
>3x_Contig1655
Length = 16228
Score = 1739 bits (876), Expect = 0.0
Identities = 905/910 (99%), Gaps = 4/910 (0%)
Strand = Plus / Minus
Query: 1 tcccgtyaattcctcctgaggatattccgctagaggataagaaggagaacgaatttggtc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4924 tcccgttaattcctcctgaggatattccgctagaggataagaaggagaacgaatttggtc 4865
Query: 61 agttgacatcagaagagtatttgtatcaaagtaagtccagggatggtaaggcattacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 agttgacatcagaagagtatttgtatcaaagtaagtccagggatggtaaggcattacagg 4805
Query: 121 acccgatattagatgctcccgcttatcatgtttcattgattacttatttgaactatctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4804 acccgatattagatgctcccgcttatcatgtttcattgattacttatttgaactatctta 4745
Query: 181 ttttgattatactaggccatatccatgatttcttaggtcttaccttccagaaggaaaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4744 ttttgattatactaggccatatccatgatttcttaggtcttaccttccagaaggaaaagc 4685
Query: 241 ataaggatattatggaacaagatgggttagcaccctggttctccacatttgagagttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4684 ataaggatattatggaacaagatgggttagcaccctggttctccacatttgagagttttt 4625
Query: 301 acgtcagaaggttgaagcaaagaattgacgattgcttctctagacctactactggcgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4624 acgtcagaaggttgaagcaaagaattgacgattgcttctctagacctactactggcgtac 4565
Query: 361 ctggaagattcatccgctgcttagaccgtgtctctcacaacttgaacgactacttcacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 ctggaagattcatccgctgcttagaccgtgtctctcacaacttgaacgactacttcacgt 4505
Query: 421 atcctggtactacatcaatgtgtctaaatctttcctcgtacaactacttaggttttgcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 atcctggtactacatcaatgtgtctaaatctttcctcgtacaactacttaggttttgcac 4445
Query: 481 aatcagagggtcaatgtaccactgcagcgctagaagccaccgataaatacggtgtttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 aatcagagggtcaatgtaccactgcagcgctagaagccaccgataaatacggtgtttatt 4385
Query: 541 ctggtggtccaaggaccagaattggtactactgatttgcacgtcatgaccgaaaaatacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384 ctggtggtccaaggaccagaattggtactactgatttgcacgtcatgaccgaaaaatacg 4325
Query: 601 tcgcacaattcgtaggtaaagaagatgcaattttgttctctatggggtacggtaccaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4324 tcgcacaattcgtaggtaaagaagatgcaattttgttctctatggggtacggtaccaatg 4265
Query: 661 ctaatttcttcaattcgttcttagatagcaaatgtttggttatctctgattctttaaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4264 ctaatttcttcaattcgttcttagatagcaaatgtttggttatctctgattctttaaatc 4205
Query: 721 atacctctattagaactggtgtccgtttatcaggagcagctgttaagacattcaagcata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4204 atacctctattagaactggtgtccgtttatcaggagcagctgttaagacattcaagcata 4145
Query: 781 atgatatgcgcgcattagagaagttgatccgtgaacaaattgttcaaggtcaatcgaaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4144 atgatatgcgcgcattagagaagttgatccgtgaacaaattgttcaaggtcaatcgaaga 4085
Query: 841 ctcatcgtccttgg-aaaaaattatcatttgtgtggaagg-ttatact-catggagggta 897
|||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 4084 ctcatcgtccttggaaaaaaattatcatttgtgtggaaggtttatactccatggagggta 4025
Query: 898 -catggctaa 906
|||||||||
Sbjct: 4024 ccatggctaa 4015
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6451
Number of Sequences: 1807
Number of extensions: 6451
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)